Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Capsid protein | HSERO_RS04550 | Not Available | Negative | 993697 - 994740 | 38226.2 |
| Gpo family capsid scaffolding protein | HSERO_RS04555 | Not Available | Negative | 994790 - 995632 | 30313.6 |
| Gp4, phage terminase, atpase subunit | HSERO_RS04560 | Not Available | Positive | 995776 - 997557 | 67622.0 |
| Portal protein | HSERO_RS04565 | Not Available | Positive | 997557 - 998609 | 38732.8 |
| response regulator | HSERO_RS04575 | Not Available | Positive | 999019 - 999396 | 13713.7 |
| hypothetical protein | HSERO_RS25160 | Not Available | Negative | 999413 - 999790 | 14377.1 |
| Hypothetical protein | HSERO_RS25165 | Not Available | Negative | 999952 - 1000674 | 26816.2 |
| Hypothetical protein | HSERO_RS24315 | Not Available | Negative | 1000679 - 1001266 | 21607.7 |
| Hypothetical protein | HSERO_RS04595 | Not Available | Negative | 1001269 - 1001631 | 13782.3 |
| Duf4123 domain-containing protein | HSERO_RS04600 | Not Available | Negative | 1001612 - 1002118 | 19243.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


