Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | HSERO_RS03620 | Not Available | Negative | 790802 - 791719 | 33496.6 |
| cysteine hydrolase family protein | HSERO_RS03625 | Not Available | Positive | 791814 - 792422 | 20579.8 |
| nucleoside/nucleotide kinase family protein | HSERO_RS03630 | Not Available | Positive | 792804 - 793421 | 22606.2 |
| abc transporter substrate-binding protein | HSERO_RS03635 | Not Available | Positive | 793484 - 794434 | 32554.4 |
| sugar abc transporter atp-binding protein | HSERO_RS03640 | Not Available | Positive | 794544 - 796109 | 55985.3 |
| abc transporter permease subunit | HSERO_RS03645 | Not Available | Positive | 796102 - 797136 | 36023.7 |
| age family epimerase/isomerase | HSERO_RS03650 | Not Available | Positive | 797158 - 798348 | 45490.5 |
| tigr02285 family protein | HSERO_RS03655 | Not Available | Negative | 798392 - 799237 | 32475.4 |
| ggdef domain-containing protein | HSERO_RS03660 | Not Available | Negative | 799268 - 800668 | 51660.3 |
| fad-binding oxidoreductase | HSERO_RS03665 | Not Available | Negative | 800673 - 802172 | 55235.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


