Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase family protein | HSERO_RS03520 | Not Available | Negative | 765264 - 766295 | 38926.6 |
| lps-assembly protein lptd | HSERO_RS03525 | Not Available | Positive | 766393 - 768693 | 84697.9 |
| peptidylprolyl isomerase | HSERO_RS03530 | Not Available | Positive | 768717 - 770207 | 54643.1 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | HSERO_RS03535 | Not Available | Positive | 770303 - 771325 | 35996.6 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | HSERO_RS03540 | Not Available | Positive | 771352 - 772134 | 29202.9 |
| hypothetical protein | HSERO_RS03545 | Not Available | Positive | 772332 - 772709 | 13723.3 |
| lactoylglutathione lyase | HSERO_RS03550 | Not Available | Positive | 772911 - 773315 | 15054.8 |
| chloride channel protein | HSERO_RS03555 | Not Available | Positive | 773420 - 774703 | 44965.9 |
| tonb-dependent receptor | HSERO_RS03560 | Not Available | Positive | 774925 - 777054 | 77005.2 |
| m48 family metallopeptidase | HSERO_RS03565 | Not Available | Negative | 777094 - 778083 | 36878.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


