Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 2-thiouridine(34) synthase mnma | HSERO_RS03470 | Not Available | Negative | 755883 - 756989 | 40494.7 |
| nudix hydrolase | HSERO_RS03475 | Not Available | Negative | 757029 - 757526 | 17804.2 |
| re/si-specific nad(p)(+) transhydrogenase subunit alpha | HSERO_RS03480 | Not Available | Positive | 757691 - 758806 | 38980.8 |
| aspartate 1-decarboxylase | HSERO_RS03485 | Not Available | Positive | 758892 - 759254 | 13412.1 |
| nad(p) transhydrogenase subunit alpha | HSERO_RS03490 | Not Available | Positive | 759325 - 759639 | 11006.9 |
| nad(p)(+) transhydrogenase (re/si-specific) subunit beta | HSERO_RS03495 | Not Available | Positive | 759636 - 761075 | 49890.9 |
| uracil phosphoribosyltransferase | HSERO_RS03500 | Not Available | Negative | 761166 - 761813 | 23819.1 |
| fad-dependent monooxygenase | HSERO_RS03505 | Not Available | Negative | 761937 - 763085 | 41390.0 |
| aminopeptidase p n-terminal domain-containing protein | HSERO_RS03510 | Not Available | Negative | 763194 - 764540 | 49404.7 |
| n-acetylmuramate alpha-1-phosphate uridylyltransferase muru | HSERO_RS03515 | Not Available | Negative | 764537 - 765253 | 26352.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


