Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | HSERO_RS03370 | Not Available | Positive | 738608 - 739813 | 42130.4 |
| l-threonylcarbamoyladenylate synthase | HSERO_RS03375 | Not Available | Positive | 739829 - 740872 | 36182.1 |
| ompw/alkl family protein | HSERO_RS03380 | Not Available | Positive | 741190 - 741927 | 25939.6 |
| flavin reductase family protein | HSERO_RS03385 | Not Available | Negative | 741997 - 742506 | 18481.7 |
| acyltransferase family protein | HSERO_RS03390 | Not Available | Negative | 742634 - 744631 | 73723.4 |
| peptide-methionine (s)-s-oxide reductase msra | HSERO_RS03395 | Not Available | Positive | 744958 - 745491 | 19971.5 |
| sam-dependent methyltransferase | HSERO_RS03400 | Not Available | Negative | 745598 - 746803 | 45348.0 |
| pyridoxamine 5'-phosphate oxidase | HSERO_RS03405 | Not Available | Negative | 746866 - 747504 | 24674.7 |
| ycei family protein | HSERO_RS03410 | Not Available | Negative | 747725 - 748297 | 20467.3 |
| ycei family protein | HSERO_RS03415 | Not Available | Negative | 748403 - 748966 | 20132.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


