Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yybh family protein | HSERO_RS03320 | Not Available | Negative | 730072 - 730503 | 15581.6 |
| zinc-finger domain-containing protein | HSERO_RS03325 | Not Available | Negative | 730570 - 730770 | 7016.43 |
| branched-chain amino acid transaminase | HSERO_RS03330 | Not Available | Negative | 730868 - 731788 | 34241.8 |
| azlc family abc transporter permease | HSERO_RS03335 | Not Available | Positive | 731951 - 732736 | 28092.7 |
| azld domain-containing protein | HSERO_RS03340 | Not Available | Positive | 732733 - 733056 | 11557.7 |
| phosphoglycerate kinase | HSERO_RS03345 | Not Available | Positive | 733179 - 734369 | 41274.7 |
| pyruvate kinase | HSERO_RS03350 | Not Available | Positive | 734597 - 736030 | 51478.6 |
| class ii fructose-bisphosphate aldolase | HSERO_RS03355 | Not Available | Positive | 736057 - 737121 | 38383.1 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | HSERO_RS03360 | Not Available | Positive | 737213 - 738109 | 32792.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | HSERO_RS03365 | Not Available | Positive | 738114 - 738611 | 17174.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


