Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | HSERO_RS03270 | Not Available | Positive | 719977 - 721032 | 37473.8 |
| recombination regulator recx | HSERO_RS03275 | Not Available | Positive | 721392 - 721856 | 17606.8 |
| adp-forming succinate--coa ligase subunit beta | HSERO_RS03280 | Not Available | Positive | 722392 - 723552 | 41116.8 |
| succinate--coa ligase subunit alpha | HSERO_RS03285 | Not Available | Positive | 723654 - 724535 | 30508.3 |
| terc family protein | HSERO_RS03290 | Not Available | Positive | 724754 - 725479 | 25716.5 |
| pilin | HSERO_RS03295 | Not Available | Positive | 725663 - 726169 | 17167.7 |
| cyclic pyranopterin monophosphate synthase moac | HSERO_RS03300 | Not Available | Negative | 726234 - 726740 | 17471.3 |
| m48 family metalloprotease | HSERO_RS03305 | Not Available | Positive | 726848 - 728404 | 57586.1 |
| duf2946 family protein | HSERO_RS03310 | Not Available | Negative | 728422 - 729030 | 22727.1 |
| yhet family hydrolase | HSERO_RS03315 | Not Available | Negative | 729023 - 730015 | 36769.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


