Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | HSERO_RS03225 | Not Available | Negative | 709408 - 710982 | 57892.6 |
| response regulator transcription factor | HSERO_RS03230 | Not Available | Negative | 711025 - 711738 | 25712.1 |
| hypothetical protein | HSERO_RS03235 | Not Available | Positive | 712071 - 712484 | 14024.6 |
| tim44 domain-containing protein | HSERO_RS03240 | Not Available | Positive | 712696 - 713649 | 32422.9 |
| hypothetical protein | HSERO_RS25000 | Not Available | Negative | 713892 - 714047 | 5912.16 |
| aliphatic sulfonate abc transporter substrate-binding protein | HSERO_RS03245 | Not Available | Negative | 714050 - 715036 | 35044.8 |
| abc transporter permease | HSERO_RS03250 | Not Available | Negative | 715059 - 715895 | 29837.9 |
| aliphatic sulfonate abc transporter substrate-binding protein | HSERO_RS03255 | Not Available | Negative | 715975 - 716961 | 35873.9 |
| sensor histidine kinase | HSERO_RS03260 | Not Available | Negative | 717317 - 717925 | 21828.2 |
| tetratricopeptide repeat-containing response regulator | HSERO_RS03265 | Not Available | Negative | 717928 - 719556 | 59903.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


