Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | HSERO_RS03075 | Not Available | Positive | 672359 - 674299 | 69221.5 |
| molecular chaperone dnaj | HSERO_RS03080 | Not Available | Positive | 674563 - 675690 | 40545.8 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | HSERO_RS03085 | Not Available | Negative | 675786 - 676613 | 29114.3 |
| deoxynucleoside kinase | HSERO_RS03090 | Not Available | Negative | 676621 - 677262 | 23944.8 |
| chemotaxis protein | HSERO_RS03095 | Not Available | Positive | 677976 - 678809 | 30016.0 |
| response regulator | HSERO_RS03100 | Not Available | Positive | 678819 - 679187 | 13514.5 |
| stas domain-containing protein | HSERO_RS03105 | Not Available | Positive | 679305 - 679613 | 11122.8 |
| chemotaxis protein chea | HSERO_RS03110 | Not Available | Positive | 679610 - 681787 | 78798.8 |
| methyl-accepting chemotaxis protein | HSERO_RS03115 | Not Available | Positive | 681819 - 683606 | 64614.8 |
| chemotaxis protein chew | HSERO_RS03120 | Not Available | Positive | 683657 - 684241 | 20809.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


