Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS02925 | Not Available | Negative | 643002 - 643736 | 25303.2 |
| 2,4'-dihydroxyacetophenone dioxygenase family protein | HSERO_RS02930 | Not Available | Negative | 643748 - 644275 | 20523.5 |
| lysr family transcriptional regulator | HSERO_RS02935 | Not Available | Negative | 644592 - 645491 | 32891.5 |
| dioxygenase | HSERO_RS02940 | Not Available | Negative | 645540 - 646382 | 30335.1 |
| doxx family protein | HSERO_RS02945 | Not Available | Negative | 646487 - 646903 | 14868.5 |
| thump domain-containing class i sam-dependent rna methyltransferase | HSERO_RS02950 | Not Available | Negative | 647080 - 648336 | 46533.7 |
| 2-hydroxychromene-2-carboxylate isomerase | HSERO_RS02955 | Not Available | Negative | 648436 - 649041 | 22257.5 |
| copd family protein | HSERO_RS02960 | Not Available | Negative | 649112 - 649537 | 16365.8 |
| glutamate-5-semialdehyde dehydrogenase | HSERO_RS02965 | Not Available | Negative | 649583 - 650851 | 45529.1 |
| dna polymerase iii subunit delta | HSERO_RS02970 | Not Available | Negative | 650901 - 651920 | 37463.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


