Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | HSERO_RS02870 | Not Available | Negative | 630986 - 631969 | 34938.6 |
| winged helix-turn-helix transcriptional regulator | HSERO_RS02875 | Not Available | Positive | 632110 - 632484 | 14202.3 |
| class i sam-dependent methyltransferase | HSERO_RS02880 | Not Available | Positive | 632541 - 633146 | 22317.8 |
| alpha/beta hydrolase | HSERO_RS02885 | Not Available | Positive | 633278 - 634102 | 29510.5 |
| duf6402 family protein | HSERO_RS02895 | Not Available | Negative | 634696 - 635916 | 46254.1 |
| ammonium transporter | HSERO_RS02900 | Not Available | Negative | 636495 - 637697 | 42456.3 |
| alkaline phosphatase d family protein | HSERO_RS02905 | Not Available | Positive | 638054 - 639682 | 60865.6 |
| iclr family transcriptional regulator | HSERO_RS02910 | Not Available | Negative | 639729 - 640526 | 29051.9 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS02915 | Not Available | Negative | 640650 - 641375 | 24675.1 |
| mfs transporter | HSERO_RS02920 | Not Available | Negative | 641473 - 642759 | 46504.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


