Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | HSERO_RS02820 | Not Available | Positive | 619344 - 620522 | 41272.5 |
| class i sam-dependent dna methyltransferase | HSERO_RS02825 | Not Available | Positive | 620559 - 621131 | 20169.0 |
| winged helix-turn-helix transcriptional regulator | HSERO_RS02830 | Not Available | Negative | 621507 - 621905 | 14887.0 |
| fmn-dependent nadh-azoreductase | HSERO_RS02835 | Not Available | Positive | 622015 - 622632 | 21577.8 |
| dsba family oxidoreductase | HSERO_RS02840 | Not Available | Positive | 622699 - 623343 | 23509.9 |
| n-acyl-d-amino-acid deacylase family protein | HSERO_RS02845 | Not Available | Negative | 623449 - 625101 | 59496.8 |
| amidase | HSERO_RS02850 | Not Available | Negative | 625155 - 627110 | 68888.5 |
| n-acyl-d-amino-acid deacylase family protein | HSERO_RS02855 | Not Available | Negative | 627133 - 628629 | 53843.1 |
| mfs transporter | HSERO_RS02860 | Not Available | Negative | 628662 - 629900 | 44574.7 |
| lysr family transcriptional regulator | HSERO_RS02865 | Not Available | Positive | 630074 - 630961 | 32251.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


