Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation diffusion facilitator family transporter | HSERO_RS02620 | Not Available | Positive | 573802 - 574719 | 32514.4 |
| hypothetical protein | HSERO_RS02625 | Not Available | Positive | 574820 - 576406 | 55584.5 |
| manganese efflux pump mntp | HSERO_RS02630 | Not Available | Positive | 576673 - 577254 | 20155.2 |
| lysr family transcriptional regulator | HSERO_RS02635 | Not Available | Negative | 577257 - 578177 | 33985.2 |
| 2-hydroxyacid dehydrogenase | HSERO_RS02640 | Not Available | Negative | 578248 - 579201 | 33539.9 |
| mfs transporter | HSERO_RS02645 | Not Available | Positive | 579602 - 581056 | 51671.2 |
| dihydroxy-acid dehydratase | HSERO_RS02650 | Not Available | Positive | 581219 - 583081 | 66528.8 |
| ai-2e family transporter | HSERO_RS02655 | Not Available | Negative | 583172 - 585052 | 67526.0 |
| tonb-dependent receptor | HSERO_RS02660 | Not Available | Positive | 585263 - 587440 | 77086.4 |
| voc family protein | HSERO_RS02665 | Not Available | Negative | 587597 - 587992 | 14631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


