Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase regulatory domain-containing protein | HSERO_RS02570 | Not Available | Positive | 564277 - 565854 | 58656.4 |
| diguanylate cyclase | HSERO_RS02575 | Not Available | Positive | 566033 - 566866 | 30298.9 |
| hypothetical protein | HSERO_RS02580 | Not Available | Negative | 566985 - 567494 | 18189.8 |
| duf2325 domain-containing protein | HSERO_RS02585 | Not Available | Negative | 567627 - 568031 | 14310.3 |
| helix-turn-helix transcriptional regulator | HSERO_RS02590 | Not Available | Negative | 568141 - 568848 | 26482.9 |
| voc family protein | HSERO_RS02595 | Not Available | Negative | 568960 - 569331 | 13820.4 |
| bile acid:sodium symporter family protein | HSERO_RS02600 | Not Available | Negative | 569461 - 570474 | 35959.1 |
| lysr family transcriptional regulator | HSERO_RS02605 | Not Available | Positive | 570586 - 571434 | 30639.0 |
| hypothetical protein | HSERO_RS02610 | Not Available | Negative | 571438 - 571836 | 14988.6 |
| duf342 domain-containing protein | HSERO_RS02615 | Not Available | Negative | 571913 - 573550 | 58046.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


