Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator ptsj | HSERO_RS02520 | Not Available | Negative | 554479 - 555774 | 46516.9 |
| glutamine amidotransferase | HSERO_RS02525 | Not Available | Negative | 555789 - 556505 | 25659.9 |
| lysr substrate-binding domain-containing protein | HSERO_RS02530 | Not Available | Negative | 556695 - 557579 | 32360.1 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS02535 | Not Available | Positive | 557829 - 558578 | 25505.2 |
| trap transporter substrate-binding protein | HSERO_RS02540 | Not Available | Positive | 558645 - 559682 | 37822.2 |
| trimeric intracellular cation channel family protein | HSERO_RS02545 | Not Available | Negative | 559765 - 560391 | 22448.2 |
| hypothetical protein | HSERO_RS02550 | Not Available | Negative | 560502 - 560711 | 6835.72 |
| pas domain-containing methyl-accepting chemotaxis protein | HSERO_RS02555 | Not Available | Negative | 561016 - 562680 | 58759.2 |
| hypothetical protein | HSERO_RS02560 | Not Available | Negative | 563045 - 563665 | 22424.3 |
| nucleotide pyrophosphohydrolase | HSERO_RS02565 | Not Available | Positive | 563807 - 564220 | 15277.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


