Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase family protein | HSERO_RS02435 | Not Available | Negative | 533595 - 534260 | 24113.3 |
| tetr/acrr family transcriptional regulator | HSERO_RS02440 | Not Available | Negative | 534412 - 535041 | 23130.1 |
| ykgj family cysteine cluster protein | HSERO_RS02445 | Not Available | Positive | 535182 - 535436 | 8831.85 |
| arsenate reductase (glutaredoxin) | HSERO_RS02450 | Not Available | Negative | 535482 - 535835 | 12877.9 |
| undecaprenyl-diphosphate phosphatase | HSERO_RS02455 | Not Available | Positive | 536120 - 536974 | 31142.9 |
| undecaprenyl-diphosphate phosphatase | HSERO_RS02460 | Not Available | Positive | 537114 - 537986 | 30877.5 |
| dna helicase recq | HSERO_RS02465 | Not Available | Positive | 538028 - 539884 | 69539.1 |
| trna (guanosine(46)-n7)-methyltransferase trmb | HSERO_RS02470 | Not Available | Negative | 540008 - 540727 | 26674.1 |
| Trna-gly | Not Available | Not Available | Positive | 540807 - 540880 | Not Available |
| hypothetical protein | HSERO_RS24245 | Not Available | Negative | 541074 - 541607 | 19698.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


