Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ile | Not Available | Not Available | Positive | 521296 - 521372 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 521380 - 521455 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 521739 - 524610 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 524748 - 524860 | Not Available |
| efflux transporter outer membrane subunit | HSERO_RS02405 | Not Available | Negative | 525480 - 526931 | 52071.9 |
| efflux rnd transporter permease subunit | HSERO_RS02410 | Not Available | Negative | 526934 - 530080 | 111904.0 |
| efflux rnd transporter periplasmic adaptor subunit | HSERO_RS02415 | Not Available | Negative | 530092 - 531300 | 42224.6 |
| tetr family transcriptional regulator | HSERO_RS02420 | Not Available | Positive | 531912 - 532547 | 23728.4 |
| transcription/translation regulatory transformer protein rfah | HSERO_RS02425 | Not Available | Negative | 532572 - 533069 | 18218.3 |
| rhodanese-like domain-containing protein | HSERO_RS02430 | Not Available | Negative | 533252 - 533575 | 11887.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


