Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | HSERO_RS02335 | Not Available | Positive | 509882 - 510166 | 10991.2 |
| dihydroorotase | HSERO_RS02340 | Not Available | Positive | 510166 - 511452 | 45337.6 |
| lysophospholipid acyltransferase family protein | HSERO_RS02345 | Not Available | Positive | 511567 - 512367 | 29176.6 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | HSERO_RS02350 | Not Available | Negative | 512297 - 513121 | 30695.0 |
| phosphomannomutase/phosphoglucomutase | HSERO_RS02355 | Not Available | Positive | 513348 - 514724 | 49493.8 |
| lipopolysaccharide heptosyltransferase i | HSERO_RS02360 | Not Available | Positive | 514770 - 515747 | 35924.5 |
| kdo hydroxylase family protein | HSERO_RS02365 | Not Available | Positive | 515907 - 516776 | 32865.5 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | HSERO_RS02370 | Not Available | Positive | 516776 - 518062 | 48178.7 |
| udp-glucose 4-epimerase family protein | HSERO_RS02375 | Not Available | Negative | 518047 - 519009 | 34747.3 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 519644 - 521177 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


