Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | HSERO_RS02285 | Not Available | Positive | 500675 - 501679 | 36612.1 |
| isopenicillin n synthase family dioxygenase | HSERO_RS02290 | Not Available | Positive | 501752 - 502738 | 36269.1 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HSERO_RS02295 | Not Available | Positive | 502854 - 503885 | 39645.0 |
| abc transporter atp-binding protein | HSERO_RS02300 | Not Available | Positive | 503903 - 504760 | 31303.4 |
| abc transporter permease | HSERO_RS02305 | Not Available | Positive | 504744 - 505547 | 28943.8 |
| amidohydrolase family protein | HSERO_RS02310 | Not Available | Positive | 505576 - 506991 | 50516.5 |
| yqge/algh family protein | HSERO_RS02315 | Not Available | Positive | 507083 - 507844 | 27398.3 |
| holliday junction resolvase ruvx | HSERO_RS02320 | Not Available | Positive | 507859 - 508245 | 14141.8 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | HSERO_RS02325 | Not Available | Positive | 508242 - 508754 | 18345.8 |
| aspartate carbamoyltransferase catalytic subunit | HSERO_RS02330 | Not Available | Positive | 508747 - 509706 | 34929.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


