Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate kinase family protein | HSERO_RS02180 | Not Available | Negative | 475745 - 476650 | 32633.8 |
| sugar-binding transcriptional regulator | HSERO_RS02185 | Not Available | Negative | 476710 - 477672 | 34326.0 |
| abc transporter substrate-binding protein | HSERO_RS02190 | Not Available | Positive | 478020 - 479375 | 49472.3 |
| carbohydrate abc transporter permease | HSERO_RS02195 | Not Available | Positive | 479558 - 480532 | 35783.7 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS02200 | Not Available | Positive | 480583 - 481344 | 27781.6 |
| had family hydrolase | HSERO_RS02205 | Not Available | Positive | 481344 - 482078 | 26101.4 |
| abc transporter atp-binding protein | HSERO_RS02210 | Not Available | Positive | 482125 - 483243 | 40264.6 |
| d-arabinitol 4-dehydrogenase | HSERO_RS02215 | Not Available | Positive | 483460 - 484893 | 52532.3 |
| xylulokinase | HSERO_RS02220 | Not Available | Positive | 484958 - 486430 | 52339.5 |
| gnat family n-acetyltransferase | HSERO_RS02225 | Not Available | Positive | 486450 - 486911 | 17750.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


