Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp cyclohydrolase ii | HSERO_RS23850 | Not Available | Negative | 5467717 - 5468403 | 24978.3 |
| gmc family oxidoreductase | HSERO_RS23855 | Not Available | Positive | 5468640 - 5470271 | 59171.8 |
| coniferyl aldehyde dehydrogenase | HSERO_RS23860 | Not Available | Positive | 5470305 - 5471723 | 51584.4 |
| fic family protein | HSERO_RS23865 | Not Available | Negative | 5471730 - 5472479 | 27328.8 |
| lipoyl synthase | HSERO_RS23870 | Not Available | Negative | 5472498 - 5473490 | 36734.1 |
| lipoyl(octanoyl) transferase lipb | HSERO_RS23875 | Not Available | Negative | 5473531 - 5474223 | 24660.5 |
| duf2917 domain-containing protein | HSERO_RS23880 | Not Available | Negative | 5474259 - 5474648 | 13874.8 |
| transcriptional regulator gcva | HSERO_RS23885 | Not Available | Positive | 5474833 - 5475753 | 34049.6 |
| duf493 family protein | HSERO_RS23890 | Not Available | Negative | 5475842 - 5476123 | 10479.7 |
| comf family protein | HSERO_RS23895 | Not Available | Positive | 5476371 - 5476973 | 22516.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


