Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS23755 | Not Available | Negative | 5444981 - 5445556 | 20346.4 |
| hypothetical protein | HSERO_RS23760 | Not Available | Positive | 5445771 - 5446235 | 16850.1 |
| hypothetical protein | HSERO_RS23765 | Not Available | Positive | 5446406 - 5446732 | 11645.2 |
| duf2863 family protein | HSERO_RS23770 | Not Available | Negative | 5446748 - 5448094 | 49370.2 |
| dmt family transporter | HSERO_RS23775 | Not Available | Negative | 5448127 - 5449059 | 32632.2 |
| metq/nlpa family abc transporter substrate-binding protein | HSERO_RS23780 | Not Available | Negative | 5449195 - 5450025 | 30582.8 |
| llm class flavin-dependent oxidoreductase | HSERO_RS23785 | Not Available | Negative | 5450146 - 5451525 | 51749.0 |
| sfnb family sulfur acquisition oxidoreductase | HSERO_RS23790 | Not Available | Negative | 5451541 - 5452806 | 45648.8 |
| sfnb family sulfur acquisition oxidoreductase | HSERO_RS23795 | Not Available | Negative | 5452849 - 5454084 | 44635.5 |
| duf3717 domain-containing protein | HSERO_RS23800 | Not Available | Positive | 5454351 - 5454557 | 7815.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


