Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bon domain-containing protein | HSERO_RS23705 | Not Available | Negative | 5434091 - 5434429 | 11413.9 |
| sigma 54-interacting transcriptional regulator | HSERO_RS23710 | Not Available | Negative | 5434673 - 5436055 | 50474.1 |
| hypothetical protein | HSERO_RS23715 | Not Available | Negative | 5436108 - 5436608 | 18137.1 |
| hamp domain-containing sensor histidine kinase | HSERO_RS23720 | Not Available | Negative | 5436598 - 5438076 | 54858.9 |
| m20/m25/m40 family metallo-hydrolase | HSERO_RS23725 | Not Available | Negative | 5438237 - 5439481 | 44491.4 |
| mfs transporter | HSERO_RS23730 | Not Available | Positive | 5439692 - 5441119 | 49266.6 |
| hd-gyp domain-containing protein | HSERO_RS23735 | Not Available | Positive | 5441446 - 5442651 | 43741.6 |
| bluf domain-containing protein | HSERO_RS23740 | Not Available | Negative | 5442747 - 5443172 | 15858.0 |
| gtp cyclohydrolase i | HSERO_RS23745 | Not Available | Negative | 5443175 - 5443918 | 27722.8 |
| flagellar basal body l-ring protein flgh | HSERO_RS23750 | Not Available | Positive | 5444223 - 5444888 | 23021.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


