Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein ured | HSERO_RS23605 | Not Available | Positive | 5414100 - 5414999 | 31949.5 |
| urease subunit gamma | HSERO_RS23610 | Not Available | Positive | 5415080 - 5415382 | 10955.4 |
| urease subunit beta | HSERO_RS23615 | Not Available | Positive | 5415393 - 5415737 | 12485.0 |
| urease subunit alpha | HSERO_RS23620 | Not Available | Positive | 5415734 - 5417434 | 60646.3 |
| urease accessory protein uree | HSERO_RS23625 | Not Available | Positive | 5417453 - 5417986 | 19578.3 |
| urease accessory protein uref | HSERO_RS23630 | Not Available | Positive | 5417990 - 5418670 | 24573.6 |
| urease accessory protein ureg | HSERO_RS23635 | Not Available | Positive | 5418739 - 5419371 | 22768.5 |
| hupe/urej family protein | HSERO_RS23640 | Not Available | Positive | 5419430 - 5420041 | 20315.4 |
| glycerol-3-phosphate dehydrogenase | HSERO_RS23645 | Not Available | Negative | 5420023 - 5421627 | 59349.6 |
| phosphonate abc transporter, permease protein phne | HSERO_RS23650 | Not Available | Negative | 5421640 - 5422473 | 30599.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


