Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter rard | HSERO_RS23555 | Not Available | Negative | 5401096 - 5401992 | 32836.3 |
| bcr/cfla family multidrug efflux mfs transporter | HSERO_RS23560 | Not Available | Negative | 5402016 - 5403236 | 43204.2 |
| abc transporter substrate-binding protein | HSERO_RS23565 | Not Available | Positive | 5403542 - 5404963 | 50192.6 |
| diguanylate cyclase | HSERO_RS23570 | Not Available | Positive | 5404979 - 5406700 | 63233.6 |
| ferritin-like domain-containing protein | HSERO_RS23575 | Not Available | Positive | 5406802 - 5407629 | 32647.8 |
| urea abc transporter substrate-binding protein | HSERO_RS23580 | Not Available | Positive | 5407999 - 5409252 | 45514.5 |
| urea abc transporter permease subunit urtb | HSERO_RS23585 | Not Available | Positive | 5409498 - 5411114 | 56669.0 |
| urea abc transporter permease subunit urtc | HSERO_RS23590 | Not Available | Positive | 5411111 - 5412241 | 41405.8 |
| urea abc transporter atp-binding protein urtd | HSERO_RS23595 | Not Available | Positive | 5412238 - 5413107 | 31727.4 |
| urea abc transporter atp-binding subunit urte | HSERO_RS23600 | Not Available | Positive | 5413126 - 5413824 | 25479.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


