Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | HSERO_RS02080 | Not Available | Positive | 453937 - 454479 | 18389.7 |
| duf808 domain-containing protein | HSERO_RS02085 | Not Available | Negative | 454476 - 455417 | 32471.4 |
| holliday junction branch migration protein ruva | HSERO_RS02090 | Not Available | Positive | 455531 - 456109 | 20121.8 |
| holliday junction branch migration dna helicase ruvb | HSERO_RS02095 | Not Available | Positive | 456149 - 457204 | 38591.5 |
| 2-keto-4-pentenoate hydratase | HSERO_RS02100 | Not Available | Positive | 457384 - 458226 | 30936.0 |
| yaii/yqxd family protein | HSERO_RS02105 | Not Available | Positive | 458246 - 458701 | 16192.5 |
| duf2147 domain-containing protein | HSERO_RS02110 | Not Available | Negative | 458713 - 459177 | 16737.2 |
| valine--trna ligase | HSERO_RS02115 | Not Available | Negative | 459335 - 462145 | 105551.0 |
| phosphomethylpyrimidine synthase thic | HSERO_RS02120 | Not Available | Positive | 462763 - 464676 | 71222.1 |
| sulfur carrier protein this | HSERO_RS02125 | Not Available | Positive | 464682 - 464882 | 6843.24 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


