Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | HSERO_RS23405 | Not Available | Positive | 5371045 - 5371563 | 19329.4 |
| aspartate dehydrogenase | HSERO_RS23410 | Not Available | Negative | 5371674 - 5372447 | 26549.1 |
| lysr substrate-binding domain-containing protein | HSERO_RS23415 | Not Available | Positive | 5372582 - 5373526 | 35283.8 |
| contact-dependent growth inhibition system immunity protein | HSERO_RS23420 | Not Available | Positive | 5373626 - 5374123 | 18214.0 |
| poni-like cognate immunity protein | HSERO_RS23425 | Not Available | Positive | 5374242 - 5375210 | 36658.1 |
| mbl fold metallo-hydrolase | HSERO_RS23430 | Not Available | Negative | 5375223 - 5376287 | 39651.5 |
| merr family transcriptional regulator | HSERO_RS23435 | Not Available | Positive | 5376455 - 5376883 | 16478.9 |
| isovaleryl-coa dehydrogenase | HSERO_RS23440 | Not Available | Positive | 5376983 - 5378167 | 42583.2 |
| 2-hydroxychromene-2-carboxylate isomerase | HSERO_RS23445 | Not Available | Positive | 5378219 - 5378821 | 22366.6 |
| ychj family protein | HSERO_RS23450 | Not Available | Positive | 5378821 - 5379231 | 15404.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


