Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | HSERO_RS23305 | Not Available | Negative | 5349060 - 5350526 | 52498.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | HSERO_RS23310 | Not Available | Negative | 5350602 - 5350904 | 11097.3 |
| rod shape-determining protein | HSERO_RS23315 | Not Available | Positive | 5351263 - 5352306 | 36947.0 |
| rod shape-determining protein mrec | HSERO_RS23320 | Not Available | Positive | 5352626 - 5353693 | 38359.6 |
| rod shape-determining protein mred | HSERO_RS23325 | Not Available | Positive | 5353690 - 5354199 | 19075.0 |
| penicillin-binding protein 2 | HSERO_RS23330 | Not Available | Positive | 5354219 - 5356189 | 72886.9 |
| rod shape-determining protein roda | HSERO_RS23335 | Not Available | Positive | 5356280 - 5357389 | 40427.4 |
| septal ring lytic transglycosylase rlpa family protein | HSERO_RS23340 | Not Available | Positive | 5357544 - 5358740 | 41103.8 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | HSERO_RS23345 | Not Available | Negative | 5358765 - 5359700 | 33467.8 |
| penicillin-binding protein activator | HSERO_RS23350 | Not Available | Positive | 5359714 - 5360997 | 44957.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


