Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | HSERO_RS23255 | Not Available | Positive | 5337460 - 5338326 | 30731.8 |
| branched-chain amino acid abc transporter permease | HSERO_RS23260 | Not Available | Positive | 5338359 - 5339363 | 35514.6 |
| abc transporter atp-binding protein | HSERO_RS23265 | Not Available | Positive | 5339360 - 5340127 | 27674.8 |
| abc transporter atp-binding protein | HSERO_RS23270 | Not Available | Positive | 5340124 - 5340828 | 25535.3 |
| zn-dependent hydrolase | HSERO_RS23275 | Not Available | Positive | 5340997 - 5342256 | 45346.4 |
| m81 family metallopeptidase | HSERO_RS23280 | Not Available | Positive | 5342283 - 5343794 | 53653.4 |
| methyl-accepting chemotaxis protein | HSERO_RS23285 | Not Available | Positive | 5343999 - 5345600 | 56929.7 |
| taud/tfda dioxygenase family protein | HSERO_RS23290 | Not Available | Negative | 5345564 - 5346454 | 33636.1 |
| cupin-like domain-containing protein | HSERO_RS23295 | Not Available | Positive | 5346585 - 5347475 | 32966.7 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | HSERO_RS23300 | Not Available | Negative | 5347548 - 5349008 | 53338.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


