Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsba family protein | HSERO_RS23210 | Not Available | Positive | 5324930 - 5325655 | 26306.1 |
| methyl-accepting chemotaxis protein | HSERO_RS23215 | Not Available | Positive | 5326110 - 5327678 | 55009.9 |
| hypothetical protein | HSERO_RS23220 | Not Available | Positive | 5328032 - 5328229 | 7111.35 |
| methyl-accepting chemotaxis protein | HSERO_RS23225 | Not Available | Positive | 5328351 - 5330099 | 61223.7 |
| had family hydrolase | HSERO_RS23230 | Not Available | Negative | 5330125 - 5330766 | 24496.2 |
| plp-dependent aminotransferase family protein | HSERO_RS23235 | Not Available | Negative | 5330865 - 5332283 | 51861.5 |
| aspartate aminotransferase family protein | HSERO_RS23240 | Not Available | Positive | 5332623 - 5333951 | 47297.8 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | HSERO_RS23245 | Not Available | Positive | 5333979 - 5335472 | 53090.3 |
| hypothetical protein | HSERO_RS25290 | Not Available | Positive | 5335487 - 5335939 | 16439.9 |
| abc transporter substrate-binding protein | HSERO_RS23250 | Not Available | Positive | 5336049 - 5337242 | 43153.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


