Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | HSERO_RS23160 | Not Available | Positive | 5314450 - 5315208 | 26881.5 |
| mfs transporter | HSERO_RS23165 | Not Available | Positive | 5315275 - 5316486 | 40700.8 |
| sigma-54-dependent transcriptional regulator | HSERO_RS23170 | Not Available | Negative | 5316483 - 5317829 | 47911.5 |
| sensor histidine kinase | HSERO_RS23175 | Not Available | Negative | 5317814 - 5319196 | 49022.6 |
| diguanylate cyclase | HSERO_RS23180 | Not Available | Positive | 5319366 - 5320913 | 57395.9 |
| 3-oxoacid coa-transferase subunit b | HSERO_RS23185 | Not Available | Negative | 5320979 - 5321629 | 22670.6 |
| coa transferase subunit a | HSERO_RS23190 | Not Available | Negative | 5321643 - 5322338 | 24853.9 |
| pas and helix-turn-helix domain-containing protein | HSERO_RS23195 | Not Available | Positive | 5322610 - 5323170 | 21134.6 |
| lysr family transcriptional regulator | HSERO_RS23200 | Not Available | Negative | 5323174 - 5324100 | 33900.3 |
| nad(p)-dependent oxidoreductase | HSERO_RS23205 | Not Available | Positive | 5324217 - 5324828 | 21323.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


