Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | HSERO_RS23110 | Not Available | Negative | 5306938 - 5307315 | 13242.1 |
| duf2145 domain-containing protein | HSERO_RS23115 | Not Available | Negative | 5307348 - 5308145 | 29813.8 |
| hypothetical protein | HSERO_RS23120 | Not Available | Negative | 5308167 - 5308577 | 13673.7 |
| helix-turn-helix domain-containing protein | HSERO_RS23125 | Not Available | Positive | 5308764 - 5309507 | 27824.0 |
| mfs transporter | HSERO_RS23130 | Not Available | Negative | 5309513 - 5310745 | 41989.3 |
| dmt family protein | HSERO_RS23135 | Not Available | Negative | 5310742 - 5311089 | 12972.3 |
| hypothetical protein | HSERO_RS23140 | Not Available | Negative | 5311186 - 5311908 | 24748.0 |
| dmt family transporter | HSERO_RS23145 | Not Available | Positive | 5312165 - 5312497 | 11528.5 |
| glxa family transcriptional regulator | HSERO_RS23150 | Not Available | Negative | 5312517 - 5313458 | 34450.4 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS23155 | Not Available | Positive | 5313576 - 5314388 | 28480.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


