Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | HSERO_RS23060 | Not Available | Negative | 5291990 - 5293276 | 45024.5 |
| atp-binding protein | HSERO_RS23065 | Not Available | Positive | 5293505 - 5294959 | 53644.5 |
| response regulator | HSERO_RS23070 | Not Available | Positive | 5294956 - 5295690 | 27283.8 |
| methyl-accepting chemotaxis protein | HSERO_RS23075 | Not Available | Negative | 5296157 - 5297707 | 55255.8 |
| efflux transporter outer membrane subunit | HSERO_RS23080 | Not Available | Negative | 5297892 - 5299352 | 51858.2 |
| efflux rnd transporter periplasmic adaptor subunit | HSERO_RS23085 | Not Available | Negative | 5299349 - 5300569 | 43911.8 |
| efflux rnd transporter permease subunit | HSERO_RS23090 | Not Available | Negative | 5300573 - 5303764 | 113329.0 |
| oxygenase mpab family protein | HSERO_RS23095 | Not Available | Positive | 5304163 - 5305041 | 32163.0 |
| hypothetical protein | HSERO_RS23100 | Not Available | Negative | 5305048 - 5305944 | 33332.5 |
| hypothetical protein | HSERO_RS23105 | Not Available | Negative | 5305941 - 5306870 | 35265.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


