Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | HSERO_RS02035 | Not Available | Positive | 445020 - 445664 | 24112.3 |
| helix-turn-helix domain-containing protein | HSERO_RS02040 | Not Available | Positive | 445806 - 446075 | 9886.84 |
| type ii toxin-antitoxin system hipa family toxin | HSERO_RS02045 | Not Available | Positive | 446069 - 447436 | 50287.0 |
| trna dihydrouridine synthase dusb | HSERO_RS02050 | Not Available | Positive | 447600 - 448622 | 37385.9 |
| fis family transcriptional regulator | HSERO_RS02055 | Not Available | Positive | 448801 - 449034 | 8749.6 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | HSERO_RS02060 | Not Available | Positive | 449132 - 450703 | 56097.1 |
| merr family transcriptional regulator | HSERO_RS02065 | Not Available | Negative | 450815 - 451858 | 37769.6 |
| duf2256 domain-containing protein | HSERO_RS24240 | Not Available | Positive | 451953 - 452132 | 7023.52 |
| fad-binding domain-containing protein | HSERO_RS02070 | Not Available | Positive | 452144 - 453463 | 48811.2 |
| thiol-disulfide oxidoreductase dcc family protein | HSERO_RS02075 | Not Available | Positive | 453453 - 453866 | 15843.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


