Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | HSERO_RS22960 | Not Available | Positive | 5268802 - 5269188 | 13657.0 |
| srpbcc family protein | HSERO_RS22965 | Not Available | Positive | 5269314 - 5269769 | 16818.3 |
| phosphoethanolamine transferase | HSERO_RS22970 | Not Available | Negative | 5269785 - 5271455 | 62528.2 |
| methyl-accepting chemotaxis protein | HSERO_RS25390 | Not Available | Negative | 5271629 - 5273191 | 56178.9 |
| amidohydrolase family protein | HSERO_RS22980 | Not Available | Negative | 5273347 - 5274183 | 30813.8 |
| mfs transporter | HSERO_RS22985 | Not Available | Negative | 5274180 - 5275421 | 44185.6 |
| gntr family transcriptional regulator | HSERO_RS22990 | Not Available | Positive | 5275722 - 5276456 | 27320.1 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS22995 | Not Available | Negative | 5276548 - 5276946 | 14635.7 |
| type ii toxin-antitoxin system mqsr family toxin | HSERO_RS23000 | Not Available | Negative | 5276948 - 5277244 | 10912.4 |
| glutathione transferase | HSERO_RS23005 | Not Available | Positive | 5277681 - 5278358 | 25331.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


