Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional nicotinamide-nucleotide adenylyltransferase/nudix hydroxylase | HSERO_RS22860 | Not Available | Negative | 5246619 - 5247668 | 39667.2 |
| nad+ synthase | HSERO_RS22865 | Not Available | Negative | 5247734 - 5249431 | 61105.2 |
| nicotinate phosphoribosyltransferase | HSERO_RS22870 | Not Available | Negative | 5249460 - 5250662 | 45676.9 |
| cysteine hydrolase | HSERO_RS22875 | Not Available | Negative | 5250693 - 5251556 | 30679.3 |
| nudix hydrolase | HSERO_RS22880 | Not Available | Positive | 5251757 - 5252422 | 24571.7 |
| hypothetical protein | HSERO_RS22885 | Not Available | Negative | 5252533 - 5252757 | 8454.37 |
| duf4148 domain-containing protein | HSERO_RS22890 | Not Available | Negative | 5252879 - 5253139 | 8567.11 |
| low affinity iron permease family protein | HSERO_RS22895 | Not Available | Negative | 5253409 - 5254044 | 23425.8 |
| spha family protein | HSERO_RS22900 | Not Available | Negative | 5254188 - 5255138 | 34575.6 |
| coniferyl-alcohol dehydrogenase | HSERO_RS22905 | Not Available | Negative | 5255184 - 5255951 | 27555.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


