Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS22815 | Not Available | Positive | 5237843 - 5238274 | 15683.2 |
| arsr/smtb family transcription factor | HSERO_RS22820 | Not Available | Negative | 5238298 - 5238630 | 12317.9 |
| nadh:flavin oxidoreductase/nadh oxidase | HSERO_RS22825 | Not Available | Positive | 5238756 - 5239844 | 39676.3 |
| hypothetical protein | HSERO_RS25125 | Not Available | Positive | 5239982 - 5240134 | 5643.15 |
| glutathione s-transferase family protein | HSERO_RS22830 | Not Available | Negative | 5240378 - 5241001 | 23270.5 |
| dmt family transporter | HSERO_RS22835 | Not Available | Positive | 5241222 - 5242118 | 30741.9 |
| ornithine cyclodeaminase family protein | HSERO_RS22840 | Not Available | Negative | 5242230 - 5243150 | 32038.7 |
| lysr family transcriptional regulator | HSERO_RS22845 | Not Available | Negative | 5243190 - 5244122 | 34604.8 |
| trm11 family sam-dependent methyltransferase | HSERO_RS22850 | Not Available | Negative | 5244315 - 5245475 | 42282.2 |
| hypothetical protein | HSERO_RS22855 | Not Available | Negative | 5245472 - 5246614 | 41652.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


