Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | HSERO_RS22770 | Not Available | Negative | 5222392 - 5223279 | 33160.2 |
| duf3300 domain-containing protein | HSERO_RS22775 | Not Available | Positive | 5223758 - 5225425 | 60074.5 |
| hypothetical protein | HSERO_RS24980 | Not Available | Positive | 5225492 - 5225746 | 9355.12 |
| type i restriction endonuclease subunit r | HSERO_RS22780 | Not Available | Negative | 5225775 - 5228924 | 118160.0 |
| restriction endonuclease subunit s | HSERO_RS22785 | Not Available | Negative | 5228943 - 5230208 | 47570.2 |
| type i restriction-modification system subunit m | HSERO_RS22790 | Not Available | Negative | 5230210 - 5232792 | 97006.0 |
| gnat family n-acetyltransferase | HSERO_RS22795 | Not Available | Negative | 5232984 - 5233505 | 19108.8 |
| gluconate 2-dehydrogenase subunit 3 family protein | HSERO_RS22800 | Not Available | Positive | 5233873 - 5234586 | 25715.8 |
| gmc family oxidoreductase | HSERO_RS22805 | Not Available | Positive | 5234638 - 5236410 | 65151.3 |
| cytochrome c | HSERO_RS22810 | Not Available | Positive | 5236422 - 5237693 | 44982.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


