Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | HSERO_RS22720 | Not Available | Negative | 5210641 - 5212170 | 55958.0 |
| response regulator | HSERO_RS22725 | Not Available | Negative | 5212154 - 5212867 | 26454.8 |
| abc transporter substrate-binding protein | HSERO_RS22730 | Not Available | Negative | 5212892 - 5214232 | 49138.2 |
| abc transporter substrate-binding protein | HSERO_RS22735 | Not Available | Positive | 5214654 - 5215973 | 48180.6 |
| carbohydrate abc transporter permease | HSERO_RS22740 | Not Available | Positive | 5216160 - 5217074 | 33659.9 |
| carbohydrate abc transporter permease | HSERO_RS22745 | Not Available | Positive | 5217091 - 5217993 | 32624.9 |
| abc transporter atp-binding protein | HSERO_RS22750 | Not Available | Positive | 5218018 - 5219151 | 40937.7 |
| badf/badg/bcra/bcrd atpase family protein | HSERO_RS22755 | Not Available | Positive | 5219154 - 5220080 | 31155.3 |
| n-acetylglucosamine-6-phosphate deacetylase | HSERO_RS22760 | Not Available | Positive | 5220077 - 5221204 | 39885.9 |
| sis domain-containing protein | HSERO_RS22765 | Not Available | Positive | 5221197 - 5222207 | 35330.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


