Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | HSERO_RS22670 | Not Available | Positive | 5197340 - 5198797 | 52964.0 |
| methyl-accepting chemotaxis protein | HSERO_RS22675 | Not Available | Negative | 5198860 - 5200653 | 62641.3 |
| hal/pal/tal family ammonia-lyase | HSERO_RS22680 | Not Available | Negative | 5200855 - 5202483 | 58688.5 |
| allantoate amidohydrolase | HSERO_RS22685 | Not Available | Negative | 5202541 - 5203794 | 44385.0 |
| c4-dicarboxylate transporter dcta | HSERO_RS22690 | Not Available | Positive | 5203961 - 5205295 | 46475.8 |
| gntr family transcriptional regulator | HSERO_RS22695 | Not Available | Positive | 5205396 - 5206082 | 25201.3 |
| methyl-accepting chemotaxis protein | HSERO_RS22700 | Not Available | Positive | 5206342 - 5208138 | 63047.2 |
| biliverdin-producing heme oxygenase | HSERO_RS22705 | Not Available | Positive | 5208341 - 5208931 | 21325.4 |
| yban family protein | HSERO_RS22710 | Not Available | Positive | 5208939 - 5209379 | 16313.2 |
| l-glyceraldehyde 3-phosphate reductase | HSERO_RS22715 | Not Available | Negative | 5209441 - 5210475 | 37692.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


