Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | HSERO_RS22625 | Not Available | Positive | 5186418 - 5187323 | 33851.7 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | HSERO_RS22630 | Not Available | Negative | 5187809 - 5188780 | 34760.9 |
| hypothetical protein | HSERO_RS25120 | Not Available | Positive | 5188949 - 5189107 | 6121.7 |
| disulfide bond formation protein b | HSERO_RS22635 | Not Available | Positive | 5189121 - 5189708 | 20680.3 |
| porin | HSERO_RS22640 | Not Available | Negative | 5189818 - 5190882 | 37637.1 |
| abc transporter atp-binding protein | HSERO_RS22645 | Not Available | Negative | 5191042 - 5192130 | 39438.5 |
| abc transporter permease | HSERO_RS22650 | Not Available | Negative | 5192208 - 5194019 | 65719.1 |
| abc transporter substrate-binding protein | HSERO_RS22655 | Not Available | Negative | 5194254 - 5195360 | 40181.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | HSERO_RS22660 | Not Available | Negative | 5195440 - 5196402 | 34563.0 |
| response regulator | HSERO_RS22665 | Not Available | Positive | 5196666 - 5197340 | 24996.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


