Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | HSERO_RS22580 | Not Available | Negative | 5178208 - 5178630 | 15229.2 |
| amidohydrolase | HSERO_RS22585 | Not Available | Negative | 5178644 - 5180527 | 68324.5 |
| hydrolase | HSERO_RS22590 | Not Available | Positive | 5180833 - 5181522 | 25596.7 |
| duf1427 family protein | HSERO_RS24580 | Not Available | Positive | 5181618 - 5181782 | 5522.14 |
| duf1427 family protein | HSERO_RS22595 | Not Available | Positive | 5181795 - 5182037 | 8672.07 |
| response regulator | HSERO_RS22600 | Not Available | Positive | 5182081 - 5182458 | 13174.0 |
| sensor histidine kinase | HSERO_RS22605 | Not Available | Positive | 5182513 - 5184087 | 57656.4 |
| helix-turn-helix transcriptional regulator | HSERO_RS22610 | Not Available | Negative | 5184100 - 5184999 | 33395.0 |
| fmn-binding negative transcriptional regulator | HSERO_RS22615 | Not Available | Negative | 5185063 - 5185701 | 23333.6 |
| pace efflux transporter | HSERO_RS22620 | Not Available | Negative | 5185784 - 5186236 | 16708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


