Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb c-terminal domain-containing protein | HSERO_RS01985 | Not Available | Positive | 435269 - 436150 | 32362.7 |
| shikimate dehydrogenase | HSERO_RS01990 | Not Available | Positive | 436239 - 437054 | 29021.7 |
| monofunctional biosynthetic peptidoglycan transglycosylase | HSERO_RS01995 | Not Available | Positive | 437081 - 437788 | 27165.1 |
| magnesium/cobalt transporter cora | HSERO_RS02000 | Not Available | Positive | 438009 - 438974 | 36562.6 |
| glycine zipper 2tm domain-containing protein | HSERO_RS02005 | Not Available | Positive | 439108 - 439578 | 16277.1 |
| anhydro-n-acetylmuramic acid kinase | HSERO_RS02010 | Not Available | Negative | 439654 - 440781 | 39252.9 |
| m23 family metallopeptidase | HSERO_RS02015 | Not Available | Negative | 440885 - 442282 | 50601.4 |
| tyrosine--trna ligase | HSERO_RS02020 | Not Available | Positive | 442540 - 443790 | 45701.2 |
| d-aminoacyl-trna deacylase | HSERO_RS02025 | Not Available | Positive | 443803 - 444276 | 16572.0 |
| ybhb/ybcl family raf kinase inhibitor-like protein | HSERO_RS02030 | Not Available | Positive | 444363 - 445010 | 23313.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


