Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ilvd/edd family dehydratase | HSERO_RS22480 | Not Available | Positive | 5145575 - 5147359 | 64535.3 |
| amidohydrolase family protein | HSERO_RS22485 | Not Available | Positive | 5147361 - 5148287 | 35663.9 |
| ggdef domain-containing protein | HSERO_RS22490 | Not Available | Positive | 5148430 - 5149857 | 53278.9 |
| serine hydrolase | HSERO_RS22495 | Not Available | Negative | 5149868 - 5151025 | 41196.9 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | HSERO_RS22500 | Not Available | Positive | 5151239 - 5152540 | 47549.5 |
| adhesin | HSERO_RS22505 | Not Available | Positive | 5153138 - 5163865 | 371385.0 |
| hypothetical protein | HSERO_RS22510 | Not Available | Negative | 5164086 - 5165207 | 37656.4 |
| had family hydrolase | HSERO_RS22515 | Not Available | Positive | 5165468 - 5166127 | 23694.3 |
| tmem175 family protein | HSERO_RS22520 | Not Available | Positive | 5166437 - 5167012 | 21449.6 |
| glyoxalase superfamily protein | HSERO_RS22525 | Not Available | Positive | 5167248 - 5167625 | 14471.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


