Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | HSERO_RS22430 | Not Available | Negative | 5132919 - 5135009 | 77461.5 |
| nad(p)-dependent alcohol dehydrogenase | HSERO_RS22435 | Not Available | Negative | 5135503 - 5136552 | 37247.6 |
| duf2442 domain-containing protein | HSERO_RS22440 | Not Available | Negative | 5136868 - 5137320 | 15965.3 |
| hypothetical protein | HSERO_RS22445 | Not Available | Negative | 5137317 - 5137745 | 16744.1 |
| aldose epimerase family protein | HSERO_RS22450 | Not Available | Negative | 5137969 - 5139033 | 38856.6 |
| xylr family transcriptional regulator | HSERO_RS22455 | Not Available | Negative | 5139030 - 5140286 | 46292.4 |
| d-xylose abc transporter substrate-binding protein | HSERO_RS22460 | Not Available | Positive | 5140664 - 5141644 | 35415.6 |
| d-xylose abc transporter atp-binding protein | HSERO_RS22465 | Not Available | Positive | 5141747 - 5143303 | 56230.7 |
| sugar abc transporter permease | HSERO_RS22470 | Not Available | Positive | 5143329 - 5144486 | 40230.8 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS22475 | Not Available | Positive | 5144750 - 5145541 | 28264.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


