Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 family protein | HSERO_RS22380 | Not Available | Positive | 5121684 - 5122391 | 25868.6 |
| gmc family oxidoreductase | HSERO_RS22385 | Not Available | Positive | 5122442 - 5124223 | 65607.6 |
| cytochrome c | HSERO_RS22390 | Not Available | Positive | 5124237 - 5125682 | 50961.5 |
| sigma-70 family rna polymerase sigma factor | HSERO_RS22395 | Not Available | Positive | 5125857 - 5126366 | 18858.2 |
| fecr domain-containing protein | HSERO_RS22400 | Not Available | Positive | 5126363 - 5127343 | 35666.1 |
| tonb-dependent siderophore receptor | HSERO_RS22405 | Not Available | Positive | 5127450 - 5129948 | 89578.3 |
| alpha/beta fold hydrolase | HSERO_RS22410 | Not Available | Negative | 5129959 - 5130783 | 29253.2 |
| ycii family protein | HSERO_RS22415 | Not Available | Negative | 5130837 - 5131145 | 10820.2 |
| fmn-dependent nadh-azoreductase | HSERO_RS22420 | Not Available | Negative | 5131158 - 5131784 | 22322.9 |
| lysr substrate-binding domain-containing protein | HSERO_RS22425 | Not Available | Positive | 5131938 - 5132894 | 34369.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


