Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate regulatory protein | HSERO_RS22335 | Not Available | Positive | 5108879 - 5110123 | 46362.5 |
| allophanate hydrolase | HSERO_RS22340 | Not Available | Negative | 5110141 - 5111556 | 50957.8 |
| urea carboxylase | HSERO_RS22345 | Not Available | Negative | 5111553 - 5115176 | 130253.0 |
| urea amidolyase associated protein uaap2 | HSERO_RS24610 | Not Available | Negative | 5115286 - 5115921 | 23362.7 |
| urea amidolyase associated protein uaap1 | HSERO_RS24615 | Not Available | Negative | 5115937 - 5116668 | 27386.5 |
| abc transporter atp-binding protein | HSERO_RS22360 | Not Available | Negative | 5116670 - 5117446 | 28701.9 |
| abc transporter permease | HSERO_RS22365 | Not Available | Negative | 5117443 - 5118258 | 29928.0 |
| hypothetical protein | HSERO_RS25115 | Not Available | Negative | 5118582 - 5118728 | 5353.63 |
| putative urea abc transporter substrate-binding protein | HSERO_RS22370 | Not Available | Positive | 5119342 - 5120418 | 37921.8 |
| torf family putative porin | HSERO_RS22375 | Not Available | Positive | 5120568 - 5121488 | 32577.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


