Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | HSERO_RS22285 | Not Available | Negative | 5096324 - 5096992 | 25492.8 |
| nad(p)-dependent oxidoreductase | HSERO_RS22290 | Not Available | Positive | 5097121 - 5098059 | 33891.9 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | HSERO_RS22295 | Not Available | Positive | 5098090 - 5098728 | 22464.6 |
| mfs transporter | HSERO_RS22300 | Not Available | Positive | 5098842 - 5100167 | 47955.8 |
| glucose 1-dehydrogenase | HSERO_RS22305 | Not Available | Negative | 5100318 - 5101067 | 25677.8 |
| lysr family transcriptional regulator | HSERO_RS22310 | Not Available | Positive | 5101259 - 5102158 | 33230.1 |
| trab/gumn family protein | HSERO_RS22315 | Not Available | Positive | 5102163 - 5103296 | 41101.5 |
| ig-like domain repeat protein | HSERO_RS22320 | Not Available | Negative | 5103325 - 5106666 | 110822.0 |
| hypothetical protein | HSERO_RS22325 | Not Available | Negative | 5107343 - 5107579 | 8954.38 |
| yitt family protein | HSERO_RS22330 | Not Available | Positive | 5108064 - 5108750 | 24286.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


