Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional rhamnulose-1-phosphate aldolase/short-chain dehydrogenase | HSERO_RS22235 | Not Available | Positive | 5084476 - 5086602 | 76349.1 |
| l-rhamnose catabolism isomerase | HSERO_RS22240 | Not Available | Positive | 5086684 - 5087979 | 47140.4 |
| amidohydrolase family protein | HSERO_RS22245 | Not Available | Negative | 5088042 - 5088971 | 33577.4 |
| mfs transporter | HSERO_RS22250 | Not Available | Negative | 5089022 - 5090317 | 47174.6 |
| hydroxyacid dehydrogenase | HSERO_RS22255 | Not Available | Negative | 5090398 - 5091324 | 32057.9 |
| rraa family protein | HSERO_RS22260 | Not Available | Negative | 5091321 - 5092010 | 23647.7 |
| smp-30/gluconolactonase/lre family protein | HSERO_RS22265 | Not Available | Negative | 5092048 - 5092968 | 33262.7 |
| mfs transporter | HSERO_RS22270 | Not Available | Negative | 5092965 - 5094302 | 47665.3 |
| amidohydrolase family protein | HSERO_RS22275 | Not Available | Negative | 5094314 - 5095261 | 34785.9 |
| lysr family transcriptional regulator | HSERO_RS22280 | Not Available | Positive | 5095389 - 5096312 | 35023.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


