Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | HSERO_RS22135 | Not Available | Negative | 5059892 - 5062465 | 95089.8 |
| duf1837 domain-containing protein | HSERO_RS22140 | Not Available | Negative | 5062458 - 5063429 | 36991.9 |
| hypothetical protein | HSERO_RS22145 | Not Available | Negative | 5064419 - 5064760 | 11465.4 |
| mechanosensitive ion channel family protein | HSERO_RS22150 | Not Available | Negative | 5064896 - 5065477 | 21074.8 |
| duf2846 domain-containing protein | HSERO_RS22155 | Not Available | Negative | 5065641 - 5066162 | 19113.0 |
| cusa/czca family heavy metal efflux rnd transporter | HSERO_RS22160 | Not Available | Negative | 5066152 - 5069373 | 116905.0 |
| efflux rnd transporter periplasmic adaptor subunit | HSERO_RS22165 | Not Available | Negative | 5069403 - 5070665 | 44740.6 |
| tolc family protein | HSERO_RS22170 | Not Available | Negative | 5070673 - 5071959 | 46643.5 |
| hypothetical protein | HSERO_RS24570 | Not Available | Negative | 5072028 - 5072381 | 12516.0 |
| lysr family transcriptional regulator | HSERO_RS22180 | Not Available | Negative | 5072645 - 5073568 | 34276.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


